PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012572608.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 286aa    MW: 32223 Da    PI: 4.8969
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012572608.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.73.1e-11134177755
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     + ErrRR r+++++  Lr+l+P+      +K++Ka+i   Av Y+++Lq
  XP_012572608.1 134 ISERRRRGRMKDKLYALRSLVPNI-----TKMDKASIIGDAVSYVHDLQ 177
                     78*********************7.....7******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.93E-17125192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.01E-13126181No hitNo description
PROSITE profilePS5088815.72127176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-16129191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-14133182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.0E-9133177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0034756Biological Processregulation of iron ion transport
GO:0071281Biological Processcellular response to iron ion
GO:0071369Biological Processcellular response to ethylene stimulus
GO:0071732Biological Processcellular response to nitric oxide
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MDEMNVHQDS LEYTNNFELH DFVDDPNFDQ FIDLIRGENE DAICNFGSNL INDCFIDNHH  60
LISSPINPLF DHNININNNN NNNIVNVYDP RCTTISSLSC FDGEIKGEGE ESSGTTNNVD  120
GKSRAKSDRS KTLISERRRR GRMKDKLYAL RSLVPNITKM DKASIIGDAV SYVHDLQAQA  180
RKLKAEVSGL EALSVTNNYQ GSINNTINVQ FTHNNYPISM KILQIDMFQV EERGYYAKIL  240
CNKGEGVAAS LYKALESLAN FNIQNSNLAT LNDNFLLTFT LNSLMC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012572608.10.0PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like isoform X2
SwissprotQ0V7X45e-89FIT_ARATH; Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR
TrEMBLA0A072VL861e-138A0A072VL86_MEDTR; Transcription factor
STRINGGLYMA13G39650.11e-117(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.18e-79FER-like regulator of iron uptake